Unipept

Unipept
Original author(s) Ghent University
Developer(s) Bart Mesuere
Initial release 3 February 2011 (2011-02-03)
Stable release
3.1.0 / 11 December 2015 (2015-12-11)[1]
Repository github.com/unipept/unipept
Development status Active
Written in Ruby, JavaScript
Type Bioinformatics, Data visualization
License MIT License
Website unipept.ugent.be

Unipept is an open source research tool developed at Ghent University. Its main feature is the biodiversity analysis of metaproteomics samples, but it also contains a tool to select peptides to use as biomarker and a tool to compare the genome of organisms based on their protein content.[2][3]

Unipept consists of a web application and a stand-alone command line tool. The web application uses interactive data visualizations to explore datasets. The command line tool contains the same functionality, but is designed for use in automated data processing pipelines.[4]

References

  1. ↑ "Unipept Releases". Retrieved January 18, 2016.
  2. ↑ Mesuere, Bart; Devreese, Bart; Debyser, Griet; Aerts, Maarten; Vandamme, Peter; Dawyndt, Peter (2012). "Unipept: Tryptic Peptide-Based Biodiversity Analysis of Metaproteome Samples". Journal of Proteome Research: 121126080549004. doi:10.1021/pr300576s. ISSN 1535-3893.
  3. ↑ Mesuere, Bart; Debyser, Griet; Aerts, Maarten; Devreese, Bart; Vandamme, Peter; Dawyndt, Peter (2015). "The Unipept metaproteomics analysis pipeline". Proteomics. 15 (8): 1437–1442. doi:10.1002/pmic.201400361. ISSN 1615-9853.
  4. ↑ "Unipept CLI documentation". Retrieved August 24, 2015.


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